[Generated — not hand-authored.] The connection graph — the corpus's interconnections made navigable. Three families: the structural typed graph the data itself declares (realization chains + bridge edges); authored
Maps to…/Distinct from…relations resolved to records where high-confidence; and latent edges discovered from the data (a primitive recurring across domains — the convergence signal). Deterministic.
Structural edges — the typed graph
The model's own internal graph, declared in the data: realization chains (each a
domain ↔ bridge ↔ domainsequence) and the bridge edges that cross substrate gaps. This is the spine — how the whole system is wired across substrates.
Realization chains (6)
- abiogenesis
abiogenesis/sc1 - biology
biology/sc1 - cognition
cognition/sc1 - entity
entity/sc1 - methodology
methodology/sc1 - value-exchange
value-exchange/sc1
Bridge edges (11)
- app-to-ecosystem-bridge: application-architecture → digital-ecosystem
- architecture-to-ecosystem-bridge: cognitive-architecture → cultural-ecosystem
- biology-to-organism-bridge: biology-substrate → organism-architecture
- chemistry-to-biology-bridge: chemistry → biology-substrate
- cognitive-development-bridge: cognitive-substrate → cognitive-architecture
- computing-to-entity-bridge: digital-computing → entity-system
- entity-to-app-bridge: entity-system → application-architecture
- hardware-to-computing-bridge: physical-hardware → digital-computing
- neural-to-cognitive-bridge: neural-hardware → cognitive-substrate
- organism-to-ecosystem-bridge: organism-architecture → ecosystem
- planck-to-chemistry-bridge: planck-substrate → chemistry
Authored edges
38 edges across 36 records — distinct-from ×31, maps-to ×7.
- abiogenesis-substrate
abiogenesis/sc1- distinct-from → biology-substrate (→ biology-substrate)
- Cmp — Compartmentalization
abiogenesis/sc1- distinct-from → biology-substrate's Mem (which extends past abiogenesis) (→ Mem — Membrane)
- D — Data
entity/sc1- maps-to → Structure (St) (→ St — Structure)
- Sh — Shape
entity/sc1- maps-to → Organization (Or) (→ Og — Organization)
- Ch — Coherence
entity/sc1- maps-to → Regulation (Rg) (→ Reg — Regulation)
- Pc — Perception
entity/sc1- maps-to → Perception (Pr) (→ Pc — Perception)
- Pn — Presentation
entity/sc1- maps-to → Action (Ac)
- Bn — Boundary
entity/sc1- maps-to → Exchange (Ex) (→ Ex — Exchange)
- Au — Authority
entity/sc1- maps-to → Protection (Pt)
- environment-context
biology/sc1- distinct-from → chemistry's St (molecular structure) (→ St — Structure)
- hadean-context
abiogenesis/sc1- distinct-from → biology's environment-context
- Pw — Power
entity/sc1- distinct-from → logic
- methodology
methodology/sc1- distinct-from → biology
- abiogenesis-r2-luca
abiogenesis/sc3/abiogenesis-r2-luca- distinct-from → translation evaluator
- analytical-philosophy
methodology/sc3/analytical-philosophy- distinct-from → phenomenology (no first-person bracketing)
- anthoceros
biology/sc3/anthoceros- distinct-from → other bryophytes where sporophyte
- aplysia-adult-cognition
cognition/sc3/aplysia-adult-cognition- distinct-from → drosophila in NEURAL ORGANIZATION
- aplysia
biology/sc3/aplysia- distinct-from → Drosophila
- bitcoin-cultural-artifact
cognition/sc3/bitcoin-cultural-artifact- distinct-from → Git's developer-platform accretion or
- bitcoin
entity/sc3/bitcoin- distinct-from → Git's content-addressing (which targets immutability + history)
- cynefin-framework
methodology/sc3/cynefin-framework- distinct-from → per-instance methodologies in that
- design-thinking
methodology/sc3/design-thinking- distinct-from → engineering-design
- dictyostelium
biology/sc3/dictyostelium- distinct-from → animal multicellularity
- distinct-from → both unicellular protists and
- engineering-design
methodology/sc3/engineering-design- distinct-from → both empirical science (engineering builds rather than discovers)
- halobacterium
biology/sc3/halobacterium- distinct-from → the 'salt-out
- distinct-from → Methanococcus's metabolism
- jujutsu
entity/sc3/jujutsu- distinct-from → content hashes
- matrix
entity/sc3/matrix- distinct-from → at-protocol (which has high T+E but low M)
- notion
entity/sc3/notion- distinct-from → Wikipedia's wiki-link substrate or
- phenomenology
methodology/sc3/phenomenology- distinct-from → ethnography (which is third-person/intersubjective)
- redis
entity/sc3/redis- distinct-from → postgres
- rhizopus
biology/sc3/rhizopus- distinct-from → septate ascomycete
- scientific-method
methodology/sc3/scientific-method- distinct-from → strategic-business methodologies in that
- scuttlebutt
entity/sc3/scuttlebutt- distinct-from → matrix (no servers)
- proto-compartment-evolution
abiogenesis/sc3/proto-compartment- distinct-from → PERSISTENT bundles like Git
- methodology
methodology/sc1- distinct-from → substrate-bridge-surface-ecosystem arrangements (biology/cognition/entity)
- paired-coupling
paired-coupling/sc3- distinct-from → V2 (substrate-domain-level cross-arrangement)
8 of 38 authored targets resolved to a concrete record; the rest are prose references kept as text (honest — a wrong link is worse than none).
Latent edges — primitives recurring across domains
The convergence signal: a primitive name appearing in more than one domain. Nobody authored these as links; the data implies them. The more domains a primitive spans, the more load-bearing the convergence.
22 primitive names recur across ≥2 domains.
- Diversity — 3 domains: cultural-ecosystem, digital-ecosystem, ecosystem
- Chemistry — 2 domains: environment-context, hadean-context
- Communication — 2 domains: cognitive-architecture, organism-architecture
- Compute — 2 domains: digital-context, methodology-context
- Connectivity — 2 domains: cultural-ecosystem, ecosystem
- Constraint — 2 domains: convergence, methodology-layer2
- Cycling — 2 domains: ecosystem, hadean-context
- Disturbance — 2 domains: environment-context, hadean-context
- Evaluation — 2 domains: application-architecture, cognitive-substrate
- Exchange — 2 domains: cultural-ecosystem, digital-ecosystem
- Genome — 2 domains: abiogenesis-substrate, biology-substrate
- Governance — 2 domains: cultural-ecosystem, digital-ecosystem
- Identity — 2 domains: cognitive-architecture, entity-system
- Interaction — 2 domains: ecosystem, methodology-layer1
- Metabolism — 2 domains: neural-hardware, organism-architecture
- Population — 2 domains: abiogenesis-substrate, cognitive-context
- Production — 2 domains: cultural-ecosystem, ecosystem
- Regulation — 2 domains: biology-substrate, ecosystem
- Structure — 2 domains: chemistry, environment-context
- Substance — 2 domains: methodology-layer2, value-exchange
- Temporal — 2 domains: ecosystem, environment-context
- Translation — 2 domains: abiogenesis-substrate, biology-substrate